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Abstract

Objective:

A major motivation for seeking disease-associated genetic variation is to identify novel risk processes. Although rare copy number variants (CNVs) appear to contribute to attention deficit hyperactivity disorder (ADHD), common risk variants (single-nucleotide polymorphisms [SNPs]) have not yet been detected using genome-wide association studies (GWAS). This raises the concern as to whether future larger-scale, adequately powered GWAS will be worthwhile. The authors undertook a GWAS of ADHD and examined whether associated SNPs, including those below conventional levels of significance, influenced the same biological pathways affected by CNVs.

Method:

The authors analyzed genome-wide SNP frequencies in 727 children with ADHD and 5,081 comparison subjects. The gene sets that were enriched in a pathway analysis of the GWAS data (the top 5% of SNPs) were tested for an excess of genes spanned by large, rare CNVs in the children with ADHD.

Results:

No SNP achieved genome-wide significance levels. As previously reported in a subsample of the present study, large, rare CNVs were significantly more common in case subjects than comparison subjects. Thirteen biological pathways enriched for SNP association significantly overlapped with those enriched for rare CNVs. These included cholesterol-related and CNS development pathways. At the level of individual genes, CHRNA7, which encodes a nicotinic receptor subunit previously implicated in neuropsychiatric disorders, was affected by six large duplications in case subjects (none in comparison subjects), and SNPs in the gene had a gene-wide p value of 0.0002 for association in the GWAS.

Conclusions:

Both common and rare genetic variants appear to be relevant to ADHD and index-shared biological pathways.

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Supplementary Material

File (appi.ajp.2011.11040551.ds001.pdf)

Information & Authors

Information

Published In

Go to American Journal of Psychiatry
Go to American Journal of Psychiatry
American Journal of Psychiatry
Pages: 186 - 194
PubMed: 22420046

History

Received: 6 April 2011
Revision received: 9 June 2011
Accepted: 7 July 2011
Published online: 1 February 2012
Published in print: February 2012

Authors

Affiliations

Evangelia Stergiakouli, Ph.D.
From MRC Centre in Neuropsychiatric Genetics and Genomics, Cardiff University School of Medicine, Cardiff, Wales; the Department of Psychiatry, Trinity Centre for Health Sciences, Dublin, Ireland; the Bute Medical School, University of St. Andrews, Fife, Scotland; and deCODE Genetics, Reykjavik, Iceland.
Marian Hamshere, Ph.D.
From MRC Centre in Neuropsychiatric Genetics and Genomics, Cardiff University School of Medicine, Cardiff, Wales; the Department of Psychiatry, Trinity Centre for Health Sciences, Dublin, Ireland; the Bute Medical School, University of St. Andrews, Fife, Scotland; and deCODE Genetics, Reykjavik, Iceland.
Peter Holmans, Ph.D.
From MRC Centre in Neuropsychiatric Genetics and Genomics, Cardiff University School of Medicine, Cardiff, Wales; the Department of Psychiatry, Trinity Centre for Health Sciences, Dublin, Ireland; the Bute Medical School, University of St. Andrews, Fife, Scotland; and deCODE Genetics, Reykjavik, Iceland.
Kate Langley, Ph.D.
From MRC Centre in Neuropsychiatric Genetics and Genomics, Cardiff University School of Medicine, Cardiff, Wales; the Department of Psychiatry, Trinity Centre for Health Sciences, Dublin, Ireland; the Bute Medical School, University of St. Andrews, Fife, Scotland; and deCODE Genetics, Reykjavik, Iceland.
Irina Zaharieva, Ph.D.
From MRC Centre in Neuropsychiatric Genetics and Genomics, Cardiff University School of Medicine, Cardiff, Wales; the Department of Psychiatry, Trinity Centre for Health Sciences, Dublin, Ireland; the Bute Medical School, University of St. Andrews, Fife, Scotland; and deCODE Genetics, Reykjavik, Iceland.
deCODE Genetics
From MRC Centre in Neuropsychiatric Genetics and Genomics, Cardiff University School of Medicine, Cardiff, Wales; the Department of Psychiatry, Trinity Centre for Health Sciences, Dublin, Ireland; the Bute Medical School, University of St. Andrews, Fife, Scotland; and deCODE Genetics, Reykjavik, Iceland.
Psychiatric GWAS Consortium: ADHD Subgroup
From MRC Centre in Neuropsychiatric Genetics and Genomics, Cardiff University School of Medicine, Cardiff, Wales; the Department of Psychiatry, Trinity Centre for Health Sciences, Dublin, Ireland; the Bute Medical School, University of St. Andrews, Fife, Scotland; and deCODE Genetics, Reykjavik, Iceland.
Ziarah Hawi, Ph.D.
From MRC Centre in Neuropsychiatric Genetics and Genomics, Cardiff University School of Medicine, Cardiff, Wales; the Department of Psychiatry, Trinity Centre for Health Sciences, Dublin, Ireland; the Bute Medical School, University of St. Andrews, Fife, Scotland; and deCODE Genetics, Reykjavik, Iceland.
Lindsey Kent, M.R.C.Psych., Ph.D.
From MRC Centre in Neuropsychiatric Genetics and Genomics, Cardiff University School of Medicine, Cardiff, Wales; the Department of Psychiatry, Trinity Centre for Health Sciences, Dublin, Ireland; the Bute Medical School, University of St. Andrews, Fife, Scotland; and deCODE Genetics, Reykjavik, Iceland.
Michael Gill, M.D., M.R.C.Psych.
From MRC Centre in Neuropsychiatric Genetics and Genomics, Cardiff University School of Medicine, Cardiff, Wales; the Department of Psychiatry, Trinity Centre for Health Sciences, Dublin, Ireland; the Bute Medical School, University of St. Andrews, Fife, Scotland; and deCODE Genetics, Reykjavik, Iceland.
Nigel Williams, Ph.D.
From MRC Centre in Neuropsychiatric Genetics and Genomics, Cardiff University School of Medicine, Cardiff, Wales; the Department of Psychiatry, Trinity Centre for Health Sciences, Dublin, Ireland; the Bute Medical School, University of St. Andrews, Fife, Scotland; and deCODE Genetics, Reykjavik, Iceland.
Michael J. Owen, F.R.C.Psych., Ph.D.
From MRC Centre in Neuropsychiatric Genetics and Genomics, Cardiff University School of Medicine, Cardiff, Wales; the Department of Psychiatry, Trinity Centre for Health Sciences, Dublin, Ireland; the Bute Medical School, University of St. Andrews, Fife, Scotland; and deCODE Genetics, Reykjavik, Iceland.
Michael O'Donovan, F.R.C.Psych., Ph.D.
From MRC Centre in Neuropsychiatric Genetics and Genomics, Cardiff University School of Medicine, Cardiff, Wales; the Department of Psychiatry, Trinity Centre for Health Sciences, Dublin, Ireland; the Bute Medical School, University of St. Andrews, Fife, Scotland; and deCODE Genetics, Reykjavik, Iceland.
Anita Thapar, F.R.C.Psych., Ph.D.
From MRC Centre in Neuropsychiatric Genetics and Genomics, Cardiff University School of Medicine, Cardiff, Wales; the Department of Psychiatry, Trinity Centre for Health Sciences, Dublin, Ireland; the Bute Medical School, University of St. Andrews, Fife, Scotland; and deCODE Genetics, Reykjavik, Iceland.

Notes

Address correspondence to Dr. Stergiakouli ([email protected]) and Prof. Anita Thapar ([email protected]).

Author Contributions

Dr. Stergiakouli and Dr. Hamshere share first authorship.

Funding Information

All authors report no financial relationships with commercial interests.Supported by Wellcome Trust grant 079711 and the Medical Research Council.

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