A Genetics-First Approach to Dissecting the Heterogeneity of Autism: Phenotypic Comparison of Autism Risk Copy Number Variants
Abstract
Objective:
Methods:
Results:
Conclusions:
Methods
Participants
Genetics-first cohorts.
Heterogeneous autism cohort.
Genetics-First Cohorts | Sample Size | Male | Age (years) | Autism | |||
---|---|---|---|---|---|---|---|
N | % | Mean | SD | N | % | ||
16p11.2 deletion | 82 | 43 | 52 | 9.6 | 3.7 | 35 | 43 |
Europe | 12 | 7 | 58 | 10.3 | 4.4 | 7 | 58 |
United States | 70 | 36 | 51 | 9.5 | 3.6 | 28 | 40 |
16p11.2 duplication | 50 | 35 | 70 | 10.8 | 6.7 | 29 | 58 |
Europe | 17 | 16 | 94 | 12.6 | 8.6 | 13 | 76 |
United States | 33 | 19 | 58 | 9.9 | 5.4 | 16 | 48 |
22q11.2 deletion | 370 | 182 | 49 | 13.4 | 3.4 | 85 | 23 |
Europe | 215 | 102 | 47 | 13.7 | 2.4 | 50 | 23 |
United States | 155 | 80 | 52 | 12.9 | 4.4 | 35 | 23 |
22q11.2 duplication | 45 | 35 | 78 | 10.1 | 4.3 | 20 | 44 |
Europe | 11 | 9 | 82 | 10.3 | 2.8 | 6 | 55 |
United States | 34 | 26 | 76 | 10.0 | 4.7 | 14 | 41 |
Heterogeneous autism | 2,027 | 1,753 | 86 | 9.1 | 4.9 | 2,027 | 100 |
Europe | 848 | 731 | 86 | 8.6 | 4.8 | 848 | 100 |
United States | 1,179 | 1,022 | 87 | 9.5 | 5.0 | 1179 | 100 |
Autism Assessment
Cognitive Assessment
Statistical Analysis
Autism prevalence in genetic variant groups.
Autism profiles between genetic variant groups.
Results
Autism Prevalence in Genetic Variant Groups
Autism Profiles Between Genetic Variant Groups
16p11.2 Deletion | 16p11.2 Duplication | 22q11.2 Deletion | 22q11.2 Duplication | Between-Group Variation | Within-Group Variation η2 (%) | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Measure | N | Mean | SD | N | Mean | SD | N | Mean | SD | N | Mean | SD | pb | η2 (%) | |
Cognitive scores | |||||||||||||||
FSIQ | 80 | 81.3 | 15.4 | 50 | 70.9 | 22.4 | 337 | 70.3 | 13.5 | 32 | 88.1 | 21.1 | <0.001 | 11.7 | 82.2 |
VIQ | 80 | 78.2 | 18.6 | 49 | 73.6 | 24.4 | 329 | 72.8 | 13.9 | 32 | 84.2 | 18.9 | <0.001 | 3.7 | 91.7 |
PIQ | 81 | 85.7 | 15.2 | 50 | 71.9 | 22.4 | 333 | 72.3 | 14.3 | 32 | 87.1 | 21.7 | <0.001 | 11.8 | 84.8 |
ADI-R scores | |||||||||||||||
Total score | 82 | 22.0 | 11.8 | 50 | 27.7 | 14.0 | 370 | 16.7 | 11.9 | 45 | 21.2 | 15.4 | <0.001c | 7.4 | 88.7 |
Social domain | 82 | 12.9 | 7.5 | 50 | 15.8 | 8.0 | 370 | 10.1 | 7.2 | 45 | 12.4 | 9.5 | <0.001c | 5.4 | 91.3 |
Subdomains | |||||||||||||||
Social interaction | 82 | 2.4 | 1.9 | 50 | 2.9 | 2.0 | 370 | 2.2 | 2.0 | 45 | 2.5 | 2.2 | 0.120 | 1.0 | 96.6 |
Peer relationships | 82 | 4.2 | 2.3 | 50 | 4.9 | 2.6 | 370 | 3.5 | 2.4 | 45 | 3.8 | 2.8 | <0.001c | 3.1 | 94.2 |
Shared enjoyment | 82 | 2.5 | 2.2 | 50 | 3.2 | 2.0 | 370 | 1.7 | 1.8 | 45 | 2.5 | 2.4 | <0.001c | 5.7 | 90.1 |
Socioemotional reciprocity | 82 | 3.9 | 2.5 | 50 | 4.8 | 2.5 | 370 | 2.7 | 2.2 | 45 | 3.7 | 2.9 | <0.001c | 7.9 | 89.8 |
Communication domain | 82 | 5.8 | 3.7 | 50 | 6.5 | 4.9 | 370 | 4.5 | 3.8 | 45 | 5.4 | 4.3 | <0.001c | 3.1 | 93.6 |
Subdomains | |||||||||||||||
Gestures | 82 | 2.4 | 2.5 | 50 | 3.1 | 2.9 | 370 | 1.7 | 2.3 | 45 | 2.7 | 2.6 | <0.001c | 3.6 | 94.7 |
Imagination and imitation | 82 | 3.5 | 1.8 | 50 | 3.4 | 2.3 | 370 | 2.8 | 2.0 | 45 | 2.7 | 2.1 | 0.009c | 2.0 | 92.2 |
RRB domain | 82 | 3.3 | 2.2 | 50 | 5.3 | 2.6 | 370 | 2.1 | 2.3 | 45 | 3.3 | 2.9 | <0.001c | 14.7 | 81.7 |
Subdomains | |||||||||||||||
Unusual interests | 82 | 0.8 | 1.0 | 50 | 1.6 | 1.1 | 370 | 0.8 | 1.0 | 45 | 0.9 | 1.0 | <0.001c | 4.2 | 92.8 |
Routines and rituals | 82 | 0.5 | 0.9 | 50 | 1.1 | 1.3 | 370 | 0.5 | 1.0 | 45 | 0.8 | 1.1 | <0.001c | 3.2 | 96.2 |
Motor mannerisms | 82 | 0.9 | 0.9 | 50 | 1.2 | 0.9 | 370 | 0.2 | 0.5 | 45 | 0.8 | 0.9 | <0.001c | 20.9 | 77.8 |
Sensorimotor interests | 82 | 1.2 | 0.8 | 50 | 1.5 | 0.7 | 370 | 0.5 | 0.7 | 45 | 0.8 | 0.9 | <0.001c | 18.8 | 74.0 |
Gender
Discussion
Conclusions
Acknowledgments
Footnote
Supplementary Material
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